Sequence Alignment

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Revision as of 12:00, 10 October 2022 by Admin (talk | contribs) (Created page with "== Problem Description== a sequence alignment is a way of arranging the sequences of DNA; RNA; or protein to identify regions of similarity that may be a consequence of functional; structural; or evolutionary relationships between the sequences. == Bounds Chart == 350px == Step Chart == 350px == Improvement Table == {| class="wikitable" style="text-align:center;" width="100%" !widt...")
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Problem Description

a sequence alignment is a way of arranging the sequences of DNA; RNA;

or protein to identify regions of similarity that may be a consequence of functional;
structural; or evolutionary relationships between the sequences.

Bounds Chart

Sequence AlignmentBoundsChart.png

Step Chart

Sequence AlignmentStepChart.png

Improvement Table

Complexity Classes Algorithm Paper Links Lower Bounds Paper Links
Exp/Factorial
Polynomial > 3
Cubic
Quadratic
nlogn
Linear
logn